Type |
RepBase TEs |
RepBase TEs |
TE Proteins |
TE Proteins |
De
novo |
De novo |
Combined TEs |
Combined TEs |
|
Length (bp) |
% of genome |
Length (bp) |
% of genome |
Length (bp) |
% of genome |
Length (bp) |
% of genome |
DNA |
15,960,075 |
2.91 |
12,157,908 |
2.22 |
39,526,595 |
7.20 |
49,110,954 |
8.96 |
LINE |
16,770,965 |
3.06 |
33,789,174 |
6.16 |
58,406,142 |
10.65 |
67,022,583 |
12.22 |
SINE |
54,001 |
0.01 |
0 |
0.00 |
6,518 |
0.00 |
58,768 |
0.01 |
LTR |
52,516,757 |
9.58 |
55,824,326 |
10.18 |
223,008,440 |
40.70 |
226,061,071 |
41.23 |
Total |
85,301,798 |
15.33 |
101,771,408 |
19.00 |
320,947,695 |
59.00 |
342,253,376 |
62.42 |