Sample Raw data(bp) Raw data Clean data(bp) Clean data Effective data (%) Q20 (%) Q30 (%) GC (%)
BWL_1 8889204 1.33G 8790448 1.31G 98.62 96.64 90.84 40.71
BWL_2 9549572 1.43G 9468076 1.42G 98.89 96.88 91.32 40.50
BWL_3 7803624 1.17G 7720330 1.15G 98.66 96.64 90.86 40.62
BWL_4 11810220 1.77G 11691152 1.75G 98.76 96.86 91.31 40.45
BWL_5 9345482 1.40G 9257722 1.39G 98.83 96.85 91.27 40.22
BWL_6 10039148 1.51G 9929304 1.49G 98.69 96.79 91.17 40.46
BWL_7 12080396 1.81G 11953338 1.79G 98.73 96.63 90.79 40.58
BWL_8 7625154 1.14G 7549916 1.13G 98.75 96.85 91.29 40.52
JFL_1 10316262 1.55G 10212558 1.53G 98.77 96.72 91.00 40.47
JFL_2 7804798 1.17G 7718160 1.15G 98.60 96.52 90.61 40.81
JFL_3 11219492 1.68G 11103264 1.66G 98.72 96.81 91.15 40.73
JFL_4 8774572 1.32G 8672816 1.30G 98.63 96.61 90.80 40.41
JFL_5 4550192 0.68G 4506960 0.67G 98.66 96.70 90.99 41.15
DLS_1 6437982 0.97G 6370380 0.95G 98.67 96.53 90.62 40.83
DLS_2 9621628 1.44G 9534270 1.43G 98.85 96.94 91.44 40.24
DLS_3 9154942 1.37G 9071040 1.36G 98.74 96.87 91.34 40.85
DLS_4 8780780 1.32G 8704170 1.30G 98.89 96.58 90.65 40.34
DLS_5 9331598 1.40G 9241430 1.38G 98.80 96.21 89.92 40.52
DLS_6 6398210 0.96G 6355132 0.95G 98.99 97.12 91.81 40.54
DLS_7 10561018 1.58G 10452984 1.56G 98.75 96.53 90.58 40.78
DLS_8 7790468 1.17G 7711004 1.15G 98.73 96.55 90.66 40.87
DLS_9 11100134 1.67G 10983862 1.64G 98.72 96.62 90.81 40.92
DLS_10 15223484 2.28G 15095270 2.26G 98.96 96.78 91.08 40.59
HS_1 10318662 1.55G 10230010 1.53G 98.91 96.67 90.85 40.52
HS_2 9598258 1.44G 9493420 1.42G 98.65 96.54 90.66 41.04
HS_3 8071266 1.21G 7978090 1.19G 98.51 96.40 90.39 40.76
HS_4 6031464 0.90G 5965206 0.89G 98.50 96.67 90.94 41.34
HS_5 11441984 1.72G 11325736 1.69G 98.75 96.81 91.19 40.48
HS_6 8636182 1.30G 8551474 1.28G 98.77 96.99 91.62 40.62
WZS_1 8937320 1.34G 8841150 1.32G 98.64 96.63 90.82 39.99
WZS_2 8653196 1.30G 8572226 1.28G 98.80 96.99 91.58 40.11
WZS_3 14758962 2.21G 14618492 2.19G 98.88 96.90 91.36 40.49
BSL_1 9710790 1.46G 9610614 1.44G 98.75 96.69 90.93 40.47
BSL_2 8528878 1.28G 8442784 1.26G 98.74 96.54 90.60 40.25
BSL_3 8876886 1.33G 8780592 1.31G 98.70 96.64 90.83 40.74